IGV Visualizations
DesignStudio has a built-in Integrative Genomics Viewer (IGV) that shows the following tracks for available On-Demand targets:
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Observed coverage—Wet-lab coverage generated from NextSeq data (2 x 151) |
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Amplicons—in silico expected coverage |
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Gaps—in silico expected gaps (if any) |
Select Show IGV and then a gene name to display the sequence for the gene. Use the following options to interact with the visualization.
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Zoom into an area of interest. |
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Pan the visualization by clicking and dragging the karyogram. |
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Select an item in the visualization to view additional information about the item. |
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Show or hide IGV elements. |
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Select to change the track view. Depending on the track view, some of the following options are not available. |
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Collapse, squish, or expand tracks |