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Methods | Illumina Annotation Engine

Illumina Annotation Engine (IAE)

Annotation with IAE populates the *.vcf file with the following values in the INFO column CSQ key:

• Genotype Index
• Transcript ID
• Functional consequence
• Canonical transcript flag
• HGVS coding nomenclature
• HGVS protein nomenclature
• HGNC gene symbol

Annotation through IAE is available for alignments against the human reference genome: UCSC build hg19.

For Research Use Only. Not for use in diagnostic procedures. 

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