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Analysis Output

To view analysis output:

1 When analysis is complete, select the Projects tab in BaseSpace Sequence Hub.
2 Select the project where the app results are stored, and then select the analysis.
3 Navigate through the following pages to view the analysis results.
Analysis Info—General information about the analysis session, including log files.
Inputs—The samples and settings specified for the analysis session.
Output Files—Output files for the sample.
DNA Analysis Outputs
{Sample_ID}_CopyNumberVariants.vcf (CNV VCF)
{Sample_ID}_SmallVariants.genome.vcf (small variants genome VCF)
DNA_SampleMetricsReport.txt
RNA Analysis Outputs
{Sample_ID}_Fusions.csv
{Sample_ID}_SpliceVariants.vcf
{Sample_ID}_HighConfidenceVariants.csv
{Sample_ID}_PublishedFusions.csv
RNA_SampleMetricsReport.txt

For Research Use Only. Not for use in diagnostic procedures. 

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