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Introduction

The BaseSpace™ Sequence Hub Tumor Normal App performs subtractive variant calling to detect somatic variants in a matched pair of tumor and normal samples. The app uses the following enhanced tools for analyzing sequencing data:

Strelka for somatic small variants.
Manta for large indel and structural variant calls.
Canvas for somatic copy number variant (CNV) calls.

For Research Use Only. Not for use in diagnostic procedures. 

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