Runs

The Runs button leads to the runs list, which allows you to sort your runs based on experiment name, state, created date, machine, and flow cell barcode.

The different states runs can be in are explained below:

State

Description

Running

Instrument is sequencing

Paused

The sequencing run has been paused

Stopped

The sequencing run has been stopped

Uploading

The instrument has finished sequencing but primary analysis is still running on instrument

Pending Analysis

Upload is complete, analysis job state for secondary analysis is queued.

Analyzing

Secondary analysis is running

Complete

Secondary analysis is complete

Failed

Secondary analysis has failed/produced an error

Needs Attention

Secondary analysis needs attention

If you want to look at a run in detail, click on the experiment name to view metrics in the Run Details page.

When you hover to the run name, you will see the following options for sharing and downloading a run.

Sharing

When you click on the Share button you see the following options:

Share: Allows you to manage sharing a run with a particular collaborator
Share by link: Allows you to forward the sharing link to any number of collaborators

 

Note

Runs and projects have separate permissions. If you share a run you do not share the project contained within the run.

Downloads

When you click on the Download button, you will have the following options:

Analysis results
Unaligned data
Aligned data
SAV data
SAV application

 

© 2011-2012 Illumina, Inc. All rights reserved.

Rev. August 20, 2012