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Coverage by Amplicon Region Plot

The Coverage by Amplicon Region plot shows the number of bases plotted against the amplicon region.

It has the following features:

u Amplicon regions with coverage values less than the low coverage threshold (0.2 × amplicon mean coverage) are highlighted in red.
u The dotted, horizontal red line marks the low coverage threshold.
u The orange line marks the moving average of all coverage values.
u Only on-target amplicon regions are shown in the plot.

Figure 2   Example Coverage by Amplicon Region Plot

Coverage values for each amplicon are detailed in the downloadable Export (CSV) file.

For Research Use Only. Not for use in diagnostic procedures. 

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