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putativefusions.csv
The putativefusions.csv file is generated from fusion calls based on the Balance5p3p and ExpressionControl target types. The file contains the following columns.
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Column |
Description |
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Gene |
Gene symbol of the targeted fusion partner |
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Transcript ID |
Transcript ID of the targeted fusion partner |
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Target ID 5′ |
Target ID of the amplicon on the 5′ of the targeted fusion partner |
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Target ID 3′ |
Target ID of the amplicon on the 3′ of the targeted fusion partner |
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Exon 5′ |
Exon(s) of the amplicon on the 5′ of the targeted fusion partner |
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Exon 3′ |
Exon(s) of the amplicon on the 3′ of the targeted fusion partner |
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Supporting Reads 5′ |
Read count of the 5′ target of the gene. |
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Supporting Reads 3′ |
Read count of the 3′ target of the gene. |
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Expression Control Reads |
Number of reads aligned to targets of type ExpressionControl. |
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Imbalance |
Calculated by the following equation:
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For Research Use Only. Not for use in diagnostic procedures.