Introduction
The BaseSpace Sequence Hub Small Pedigree Workflow App performs joint calling on 2–4 samples and will perform de novo calling if the pedigree contains a trio (proband, mother, and father). The app uses the following enhanced tools for analyzing sequencing data:
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Strelka for small variants |
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Manta for large indel and structural variant calls |
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Canvas for somatic copy number variant calls |
Small Pedigree Workflow v1.0 BaseSpace App Online Help
For Research Use Only. Not for use in diagnostic procedures.