IGV Visualizations

DesignStudio includes an embedded Integrative Genomics Viewer (IGV) that shows the following tracks for available On-Demand targets:

• Expected coverage—Wet-lab coverage generated from NextSeq data (2 x 151)
• Amplicons—in silico expected coverage
• Gaps—in silico expected gaps (if any)
• Hg19—Reference track

Use the following options to interact with the visualization.

• Zoom into an area of interest.
• Pan the visualization by clicking and dragging or by selecting the left and right arrows on the karyogram.
• Select an item in the visualization to view additional information about the item.
• Show or hide IGV elements.
• Karyotype Panel
• Track Labels
• Center Line
• Cursor Guide
• Select to change the track view.
• Set track name
• Set track height
• Collapse, squish, or expand tracks
• Remove track