Delete FASTQ Files

Use the command-line interface to delete FASTQ FASTQ files attached to cases. Staged FASTQ files cannot be deleted. For information about setting up the tool, see Command-Line Interface.

1. Use the delete command to delete FASTQ files by sample ID.

$ java -jar wgs-cli-<version>.jar delete --sampleId <sample ID>

Where:

sampleId is the sample ID the FASTQ file is linked to.

Example:

java -jar wgs-cli.jar delete --sampleId sample123