Documentation & Literature

Software Documentation

Description
 
File Info
Date Posted
BaseSpace Sequence Hub Data Storage Management Quick Reference Card

Instructions for managing data storage in BaseSpace Sequence Hub.

BaseSpace Sequence Hub Core Apps Release Notes

View the BaseSpace Squence Hub Core Apps software release notes for new features and changes introduced in the latest versions.

MiSeq Reporter Workflows in BaseSpace Customer Release Notes

Release notes for MiSeq Reporter workflows in BaseSpace.

BaseSpace Sequence Hub App Documentation

Description
 
File Info
Date Posted
16S Metagenomics BaseSpace App Documentation

For instructions on using the 16S Metagenomics BaseSpace App, see 16S Metagenomics v1.0 Online Help.

Amplicon DS BaseSpace App Documentation

For instructions on using the Amplicon DS BaseSpace App, see Amplicon DS v1.2 Online Help.

BWA Enrichment BaseSpace App Documentation

For instructions on using the BWA Enrichment BaseSpace App, see the BWA Enrichment v2.1 Online Help.

BWA Whole Genome Sequencing BaseSpace App Documentation

For instructions on using the BWA Whole Genome Sequencing BaseSpace App, see BWA Whole Genome Sequencing v1.0 Online Help.

TruSeq Targeted RNA BaseSpace App Documentation

For instructions on using the TruSeq Targeted RNA BaseSpace App, see TruSeq Targeted RNA v1.0 Online Help.

MethylSeq BaseSpace App Documentation

For instructions on using the MethylSeq BaseSpace App, see MethylSeq v1.0 Online Help.

RNA-Seq Alignment App Documentation

For instructions on using the RNA-Seq Alignment BaseSpace App, see RNA-Seq Alignment v2.0 Online Help.

TruSight Tumor 15 BaseSpace App Documentation

For instructions on using the TruSight Tumor 15 BaseSpace App, see TruSight Tumor 15 v2.0.1 Online Help.

Tumor Normal BaseSpace App Documentation

For instructions on using the Tumor Normal BaseSpace App, see Tumor Normal v6.0 Online Help.

TruSeq Amplicon BaseSpace App Documentation

For instructions on using the TruSeq Amplicon BaseSpace App, see either the TruSeq Amplicon 2.0 Online Help or the TruSeq Amplicon 3.0 Online Help.

RNA Express BaseSpace App Documentation

For instructions on using the RNA Express BaseSpace App, see RNA Express v1.0 Online Help.

mtDNA Variant Analyzer BaseSpace App Documentation

For instructions on using the mtDNA Variant Analyzer BaseSpace App, see mtDNA Variant Analyzer v1.0 Online Help.

SureCell RNA Single-Cell BaseSpace App Documentation

For instructions on using the SureCell RNA Single-Cell App, see SureCell RNA Single Cell Online Help.

Cufflinks Assembly & DE BaseSpace App Documentation

For instructions on using the Cufflinks Assembly & DE BaseSpace App, see Cufflinks Assembly & DE v1.0 Online Help.

Small RNA BaseSpace App Documentation

For instructions on using the Small RNA BaseSpace App, see Small RNA v1.0 App Online Help.

TruSeq Long-Reads Assembly BaseSpace App Documentation

For instructions on using the TruSeq Long-Reads Assembly BaseSpace App, see TruSeq Long-Reads Assembly v1.1 Online Help.

TopHat and Cufflinks RNA-Seq BaseSpace App Documentation

For instructions on using the TopHat and Cufflinks RNA-Seq BaseSpace App, see TopHat Alignment and Cufflinks v1.0 Online Help

mtDNA Variant Processor BaseSpace App Documentation

For instructions on using the mtDNA Variant Processor BaseSpace App, see mtDNA Variant Processor v1.0 Online Help.

TruSeq Phasing BaseSpace App Documentation

For instructions on using the TruSeq Phasing BaseSpace App, see TruSeq Phasing v1.1 Online Help.

TruSight Tumor 170 BaseSpace App Documentation

For instructions on using the TruSight Tumor 170 App, see TruSight Tumor 170 v1.0 Online Help.

Small Pedigree Workflow BaseSpace App Documentation

For instructions on using the Small Pedigree Workflow BaseSpace App, see the Small Pedigree Workflow v1.0 App Online Help.

Enrichment BaseSpace App Documentation

For instructions on using the Enrichment BaseSpace App, see Enrichment v3.1 Online Help.

BaseSpace RNA Amplicon App Documentation

For instructions on using the BaseSpace RNA Amplicon App, see the BaseSpace RNA Amplicon v1.0 App Online Help.

BaseSpace DNA Amplicon App Documentation

For instructions on using the BaseSpace DNA Amplicon App, see the BaseSpace DNA Amplicon v2.0 App Online Help.

Whole Genome Sequencing BaseSpace App Documentation

For instructions on using the Whole Genome Sequencing BaseSpace App, see the Whole Genome Sequencing v8.0 Online Help.

RNA-Seq Differential Expression App Documentation

For instructions on using the RNA-Seq Differential Expression BaseSpace App, see RNA-Seq Differential Expression v1.0 Online Help.

UMI Error Correction BaseSpace App Documentation

For instructions on using the UMI Error Correction BaseSpace App, see the UMI Error Correction v1.0 App Online Help.

Product Literature

Description
Document Type
File Info
Date Posted
Data Sheet
(3 MB)

Tech Notes

Description
Document Type
File Info
Date Posted
Technical Note
(< 1 MB)
01/13/2017
Technical Note
(< 1 MB)
07/12/2017
Technical Note
(< 1 MB)
01/16/2017
Technical Note
(< 1 MB)
02/17/2017
White Paper
(< 1 MB)
10/04/2018