VCF FORMAT Fields
|
ID |
Description |
|---|---|
|
GT |
Genotype |
|
FT |
Sample filter, 'PASS' indicates that all filters have passed for this sample |
|
GQ |
Genotype Quality |
|
PL |
Normalized, Phred-scaled likelihoods for genotypes as defined in the VCF specification |
|
PR |
Number of spanning read pairs which strongly (Q30) support the REF or ALT alleles |
|
SR |
Number of split-reads which strongly (Q30) support the REF or ALT alleles |