Sample Information

Statistic

Definition

Total PF Reads

The number of reads passing filter.

Percent Q30 Bases

The percentage of bases with a quality score of 30 or higher. The number is calculated over both reads.

Percent On-target Aligned Reads

The percentage of aligned reads that are on-target.

Autosome Call Rate

The percentage of targeted bases covered by PASS variants reported on autosomes in the genome VCF file.