RNA-Seq Alignment v2.0 Online Help

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Workflow Requirements
Reference Genomes
Workflow

Parameters

Set Analysis Parameters
Advanced Options

Analysis Methods

STAR
Manta
Bowtie
Salmon
Isaac Variant Caller

Output

Analysis Output
Analysis Info
Log Files

Output Files

BAM File Format
VCF File Format
gVCF File Format
Quantification Files

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At Illumina, our goal is to apply innovative technologies to the analysis of genetic variation and function, making studies possible that were not even imaginable just a few years ago. It is mission critical for us to deliver innovative, flexible, and scalable solutions to meet the needs of our customers. As a global company that places high value on collaborative interactions, rapid delivery of solutions, and providing the highest level of quality, we strive to meet this challenge. Illumina innovative sequencing and array technologies are fueling groundbreaking advancements in life science research, translational and consumer genomics, and molecular diagnostics.

For Research Use Only. Not for use in diagnostic procedures (except as specifically noted).

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