Analysis Output | Sample Analysis Reports | Coverage by Amplicon Region Plot

Coverage by Amplicon Region Plot

The Coverage by Amplicon Region plot shows the number of bases plotted against the amplicon region. It has the following features:

Amplicon regions with coverage values less than the low coverage threshold (0.2 * amplicon mean coverage) are highlighted in red.
The horizontal red line marks the low coverage threshold.
The orange line marks the moving average of all coverage values.
Off-targets are excluded in the plot.

Figure Example Coverage by Amplicon Region Plot

Coverage values for each amplicon are detailed in the downloadable Export (CSV) file.