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Individual Samples Comparison Summary
Statistic | Definition |
---|---|
Assay ID |
Unique ID for each amplicon |
Gene |
Gene targeted by assay |
Transcript |
Transcript targeted by assay |
Left Exon |
Left exon of targeted region |
Right Exon |
Right exon of targeted region |
Normalized Count 1, 2 |
Averaged and normalized count across samples in group 1 and 2, respectively |
Fold Change |
Fold change of normalized read counts between groups 1 and 2 |
p-val |
P-value of differential expression between groups 1 and 2 |
q-val |
Q-value of differential expression between groups 1 and 2 |
Under Differential expression between sample groups, you can view pairwise differential expression between all pairs sample groups. Select the comparison for display in the drop-down menu. You can view the following metrics:
▶ | The Normalized read count comparison is a scatter plot comparison of the normalized read counts between the 2 samples. |
▶ | The Differential expression results table provides a comparison between the 2 sample groups per gene or transcript. |
Statistic | Definition |
---|---|
Assay ID |
Unique ID for each amplicon |
Gene |
Gene targeted by assay |
Transcript |
Transcript targeted by assay |
Left Exon |
Left exon of targeted region |
Right Exon |
Right exon of targeted region |
Sample 1, 2 Normalized Count |
Normalized counts for sample 1 and 2, respectively |
Log Ratio |
Ln (Sample 1 Normalized Count/Sample 2 Normalized Count) |
Under Comparison of individual samples, you can view pairwise differential expression between all pairs sample groups. Select the comparison for display in the drop-down menu. You can view the following metrics:
▶ | The Normalized read count comparison is a scatter plot comparison of the normalized read counts between the 2 sample groups. |
▶ | The Differential expression results table provides a comparison between the 2 sample groups per gene or transcript. |