Revision History
Introduction
Compatible Libraries
Workflow Requirements
Versions
Workflow Diagram
Set Analysis Parameters
Analysis Methods
Alignment
Variant Calling
Somatic Variant Caller
Illumina Annotation Service
Analysis Output
Analysis Info
Log Files
Inputs
Output Files
BAM File Format
VCF File Format
Genome VCF Files
Annotation Files
Summary File
Sample Analysis Reports
Amplicon Summary
Small Variants Summary
Coverage Summary
Coverage by Amplicon Region Plot
Summary Analysis Report
Manifest Information
Amplicon Summary
Small Variants Summary
Coverage Summary
All Files
Analysis Methods
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Variant Calling
Variant Calling
Variant calling is performed with the Somatic Variant Caller.
Analysis Methods
Alignment
Variant Calling
Somatic Variant Caller
Illumina Annotation Service
Amplicon DS v1.2 App Online Help