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Analysis Methods | Manta Structural Variant Caller

Manta Structural Variant Caller

Manta Structural Variant Caller calls structural variants (SVs) from mapped paired-end sequencing reads. Manta identifies candidate SVs from discordant pair and split-read alignments, then performs local assembly and realignment to refine candidates.

For more information, visit github.com/Illumina/manta.

Whole Genome Sequencing v5.0 App Online Help

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