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Methods | Illumina Annotation Engine

Illumina Annotation Engine (IAE)

Annotation with IAE populates the *.vcf file with the following values in the INFO column CSQ key:

Genotype Index
Transcript ID
Functional consequence
Canonical transcript flag
HGVS coding nomenclature
HGVS protein nomenclature
HGNC gene symbol

Annotation through IAE is available for alignments against the human reference genome: UCSC build hg19.

For Research Use Only. Not for use in diagnostic procedures. 

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