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Methods | Manta (SV Caller)

Manta (Structural Variant Caller)

Manta calls structural variants (SVs) from mapped paired-end sequencing reads. Manta discovers candidate SVs from discordant pair and split-read alignments, followed by local assembly and realignment to refine candidates.

For more information, see https://github.com/Illumina/manta.

For Research Use Only. Not for use in diagnostic procedures. 

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