MiniSeq Documentation

  • Supporting Documents

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  • Cluster Optimization Overview

    Strategies for optimizing cluster density and preventing and diagnosing clustering issues on Illumina flow cells.

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    Apr 26, 2021


  • Indexed Sequencing Overview

    The sequencing process for single- and dual-indexed runs on Illumina instruments.

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    Aug 13, 2024


  • Security and Networking

    Guidelines for managing the security of the control computer on your sequencing system. Use these guidelines to configure your system and ensure a more secure operating environment.

    It is strongly recommended that you review this documentation to keep your instrument secure.

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    Jan 12, 2024


Product Literature

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MiniSeq System Brochure
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Brochure 2 MB Jan 7, 2016
Oncology Flipbook
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Brochure < 1 MB Jan 8, 2016
Complete Small RNA Sequencing Solutions on the MiniSeq System
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Application note 2 MB Jan 11, 2016
Interrogating Cancer-Predisposing Germline Variants on the MiniSeq System
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Application note 1 MB Dec 18, 2015
Illumina Proactive Service connectivity guide - MiniSeq
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Brochure < 1 MB Jun 18, 2019
Illumina Sequencing Platforms Brochure
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Brochure 1 MB Oct 9, 2024
MiniSeq Sequencing System
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Data sheet < 1 MB
MiniSeq Sequencing System Specification Sheet
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Data sheet 5 MB Jun 10, 2021
Microbial de novo assembly with linked-read technology
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Application note 2 MB Aug 31, 2021
Rapid detection of respiratory pathogens using the MiniSeq System
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Application note < 1 MB
Faster detection of respiratory viruses using the MiniSeq Rapid Reagent Kit and Illumina RNA Prep with Enrichment
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Application note < 1 MB Sep 24, 2020

Technical Notes

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Data Security with Illumina Proactive
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Technical note < 1 MB Oct 4, 2022