MiSeq Software Updater

The MiSeq v3.1 software updater contains the latest version of MiSeq Control Software (MCS v3.1).

For full installation instructions, see the installation notes included with the updater download package. Reference Genome v1.1.0.0 is compatible with Local Run Manager for MiSeq. Some Local Run Manager modules may require update to the Reference Genome. Refer to the module instructions on the Local Run Manager support page.

For upgrade information, see the upgrade guide notes included with the updater download package.

Note: The software updater can also be installed in the RUO drive of MiSeqDx instruments with dual boot configuration. If you are not sure if your instrument has dual boot configuration, contact Illumina Tech Support.


Files

File Name
File Info
Date Posted
MiSeq Updater v3.1 ZIP(574 MB) 02/03/2019
MiSeq Software v3.1 Release Notes PDF(< 1 MB) 02/03/2019
MiSeq Software v3.1 Upgrade Guide PDF(< 1 MB) 02/13/2019
MiSeq Updater v2.6 ZIP(1 GB) 05/27/2016
MiSeq Software v2.6 Release Notes PDF(< 1 MB) 06/08/2016
MiSeq Updater v2.5.0.4 ZIP(508 MB) 09/22/2014
MiSeq Software v2.5 Release Notes PDF(< 1 MB) 09/23/2014
MiSeq Reporter v2.4 ZIP(342 MB) 03/24/2014
MiSeq Software v2.4 Release Notes PDF(< 1 MB) 05/01/2014
Reference Genome Updater v1.1 ZIP(8 GB) 10/15/2012