Analysis Output | Analysis Reports | Sample Reports | Insert Information

Insert Information

Table 10   Insert Information Table

Statistics

Definition

Insert Length Median

Median length of a sequenced fragment. The fragment length is calculated based on the locations at which a read pair aligns to the reference. The read mapping information is parsed from the BAM files.

Insert Length S.D.

Standard deviation of the sequenced fragment length.

Duplicates (% Reads)

Percentage of paired reads that have duplicates from a sub-sampled set of 4 million reads or from the total number of reads when there are less than 4 million reads.