NextSeq 550 System Support


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Custom Protocol Selector

Generate end-to-end documentation tailored to your experiment.

Library Prep and Array Kit Selector

Determine the best kit for your project type, starting material, and method or application.

Local Run Manager Module Selector

Find the analysis modules compatible with your instrument and Local Run Manager configuration.

Sequencing Coverage Calculator

Determine reagents and sequencing runs for your desired coverage.


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Maximize the effectiveness of your Illumina system, train new employees, or learn the latest techniques and best practices. We offer support webinars, online courses, expert video tips, and instructor-led trainings.

Featured Training
NextSeq: How to Start a Run

Demo of how to prepare the reagent cartridge and start a sequencing run using NextSeq Control Software (NCS).

Local Run Manager v2 (RUO): Introduction - On- and Off-Instrument

Overview of the Local Run Manager software.

NextSeq 550: Run Quality and Best Practices

Review of problem phenotypes and the underlying causes.