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Processing Fusions CSV
TruSight Tumor 170 fusion variants with True in the KeepFusions column of the {Sample_ID}_Fusions.csv are copied to the Watson for Genomics output fusion file. The order of Gene1/Gene2 reported in the TruSight Tumor 170 Fusions CSV file does not indicate directionality of the fusion, so each passing fusion pair is output in both directions. Output fusion gene pairs are separated by a dash (-). Fusions with overlapping genes (denoted by semi-colon(;) in the {Sample_ID}_Fusions.csv) are output into separate rows.
For example, the following row in the TruSight Tumor 170 app {Sample_ID}_Fusions.csv
Gene A |
Gene B |
... |
KeepFusion |
Gene 1 |
Gene2;Gene3 |
... |
TRUE |
Is output in the Watson for Genomic fusion file with four rows:
Gene1-Gene2 |
Gene2-Gene1 |
Gene1-Gene3 |
Gene3-Gene1 |
For Research Use Only. Not for use in diagnostic procedures.