Manage Data/Downloading Data/Download Datasets

Download Data Sets

Use the BaseSpace Sequence Hub Downloader to download FASTQ or general data sets. Data sets are linked to biosamples and are listed on the Datasets tab of the biosample details page. To download a package of data sets from a run, see Download Run Data Files.


The BaseSpace Sequence Hub Downloader has been updated and renamed to BaseSpace Sequence Hub Downloader. Make sure that you have the correct version of the downloader before proceeding.

1. From the Biosamples page, select the biosample.
2. Select the Datasets tab.
3. [Optional] Select a data set name to view a list of file details.
4. Select the checkboxes for the desired data sets.
5. Select File, point to Download, then select Dataset.