HiSeq Analysis Software v0.9 Support
Illumina is discontinuing development of HiSeq Analysis Software v0.9
Although the software remains available for download, Illumina recommends transitioning to a newer solution. BaseSpace Sequence Hub is continually optimized and offers fully supported software solutions, including the Isaac Enrichment and Isaac Whole Genome Sequencing apps. The bcl2fastq Conversion Software can demultiplex and convert BCL files to FASTQ files from a local computer.
Documentation
Software Downloads
Product Information
Tools
View AllCustom Protocol Selector
Generate end-to-end documentation tailored to your experiment.
Library Prep and Array Kit Selector
Determine the best kit for your project type, starting material, and method or application.
Sequencing Coverage Calculator
Determine reagents and sequencing runs for your desired coverage.
Training
View AllMaximize the effectiveness of your Illumina system, train new employees, or learn the latest techniques and best practices. We offer support webinars, online courses, expert video tips, and instructor-led trainings.
Featured Training
Sequencing: Illumina Technology
Overview of the Illumina sequencing workflow, from extracting nucleic acids to completing a sequencing run.
Sequencing: Fundamentals
Description of DNA and RNA with a discussion on traditional sequencing and how it compares to sequencing by synthesis
FASTQ Processing Tools for Data Analysis
Descriptions of FASTQ files, generation tools, and file processing. Compares Illumina performance metrics and third-party outputs.