NextSeq 1000/2000 Sequencing System Documentation

  • Supporting Documents

    SIZE

    DATE


  • Indexed Sequencing Overview

    The sequencing process for single- and dual-indexed runs on Illumina instruments.

    View Online Help

    Apr 26, 2021


  • Security and Networking

    Guidelines for managing the security of the control computer on your sequencing system. Use these guidelines to configure your system and ensure a more secure operating environment.

    It is strongly recommended that you review this documentation to keep your instrument secure.

    View Online Help

    Jan 12, 2024


Product Literature

TYPE

SIZE

DATE

Data concordance between the NextSeq 1000/2000 and NextSeq 550 Sequencing Systems
Download
Application note < 1 MB Mar 23, 2020
Illumina Sequencing Platforms Brochure
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Brochure 15 MB
DRAGEN Bio-IT Platform Onboard NextSeq 1000 and NextSeq 2000 Systems
Download
Data sheet < 1 MB Aug 2, 2022
NextSeq 1000 and NextSeq 2000 Sequencing Systems specification sheet
Download
Data sheet < 1 MB May 30, 2024
Explore the transcriptome with single-cell resolution
Download
Technical note 1 MB Mar 1, 2022
Data Security with Illumina Proactive
Download
Technical note < 1 MB Oct 4, 2022
Multiomic interrogation of the immune system at single-cell resolution
Download
Technical note 1 MB Mar 1, 2022
Unify single-cell gene expression and chromatin accessibility
Download
Technical note 1 MB
Resolve the whole transcriptome within tissue architecture
Download
Technical note 3 MB Jul 1, 2021
XLEAP-SBS chemistry expands NextSeq 1000 and NextSeq 2000 System capabilities
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Technical note < 1 MB
Full-length V(D)J immune repertoire sequencing (IR-Seq) on the NextSeq™ 1000 and NextSeq 2000 Systems
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Application note < 1 MB
16S rRNA sequencing on NextSeq™ 1000 and NextSeq 2000 Systems
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Application note < 1 MB Mar 16, 2023
High-plex spatial proteogenomics of FFPE tissue sections
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Application note 2 MB
NextSeq™ 1000 and NextSeq 2000 single-cell RNA sequencing solution
Download
Application note < 1 MB May 30, 2024
NextSeq 1000 and NextSeq 2000 RNA sequencing solution
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Application note < 1 MB May 30, 2024
A shotgun metagenomics NGS workflow for assessing microbial populations in complex samples
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Application note < 1 MB
High-resolution, high-throughput spatial transcriptomics of complex tissues
Download
Application note 3 MB Aug 24, 2021
Small whole-genome sequencing on NextSeq 1000 and NextSeq 2000 Systems
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Application note < 1 MB
NextSeq 1000 and NextSeq 2000 exome sequencing solution
Download
Application note < 1 MB