DNA Expanded Metrics
|
Metric |
Description |
|---|---|
|
MEAN_TARGET_COVERAGE (Count) |
Median fragment coverage of target bases. |
|
PCT_ALIGNED_READS (%) |
Percentage of reads that are mapped. |
|
MEDIAN_BIN_COUNT_CNV_TARGET |
Median of the raw read counts (normalized by region size) of each copy number variant target region. This metric indicates the quality of copy number variant (amplification) calls. |
|
PCT_PF_UQ_READS (%) |
Percentage of unique reads passing filter. |
|
PCT_READ_ENRICHMENT (%) |
Percentage of reads enriched for the target regions. |
|
PCT_TARGET_0.4X_MEAN (%) |
Percentage of target bases with target coverage greater than 0.4 times the mean. |
|
PCT_TARGET_250X (%) |
Percent target bases with greater than 250X coverage. |
|
TOTAL_PF_READS (Count) |
Total number of reads passing filter. |