Product Compatibility

Sample Information

Before preparing libraries, record information about your samples using the available options for your sequencing system.

Index Kits

Bead-Based Compatible Index Kits

  • Nextera XT Index Kit v2 Set A (96 indexes, 384 samples)
  • Nextera XT Index Kit v2 Set B (96 indexes, 384 samples)
  • Nextera XT Index Kit v2 Set C (96 indexes, 384 samples)
  • Nextera XT Index Kit v2 Set D (96 indexes, 384 samples)
  • Nextera XT Index Kit (24 indexes, 96 samples)
  • Nextera XT Index Kit (96 indexes, 384 samples)

Standard Normalization Compatible Index Kits

Sequencing Guidelines

After library preparation, denature and dilute libraries to the appropriate loading concentration.

Additional Resources

Custom Protocol Selector—Generate customized end-to-end workflow instructions based on the Illumina products you use for library prep, sequencing, and analysis.

Library Prep Kit Selector—Helps you determine the best kit for your needs based on your project type, starting material, and the method or application. Includes recommended run parameters and analysis options.

Sequencing Coverage Calculator—Helps you determine the appropriate run parameters for the desired coverage for your experiment.