MiSeq Reporter is the bioinformatics data analysis software built into the MiSeq. MiSeq Reporter is available as a standalone software for installation on a US–English, 64–bit Windows workstation. See Computing Requirements.
For installation of MiSeq Reporter, see the Install Supporting Microsoft Files section of the MiSeq Reporter Software Guide.
The Illumina Annotation Engine Support files enable analysis of the TruSight Tumor 15 workflow. This download includes a link to the installer from a secure file transfer location.
dbSNP is the NCBI databse used to annotate variants found during analysis by MiSeq Reporter. This download includes a link to the updater from a secure file transfer location, and instructions for downloading and installing the update.
miRBase is the reference database used for the small RNA workflow in MiSeq Reporter. This download includes a link to the pre-formatted updater from a secure file transfer location and instructions for downloading and installing the update.
MiSeq software release notes describe features and changes introduced in the latest versions of MiSeq Control Software (MCS) and related software components, including MiSeq Reporter.
The MiSeq v3.0 software updater has been temporarily removed from the web. Contact Illumina Tech Support for more information.
For full installation instructions, see the installation notes included with the updater download package. The most recent update still uses Reference Genome v220.127.116.11 for MiSeq and there is no need to update the reference genome.
Note: The software updater can also be installed in the RUO drive of MiSeqDx instruments with dual boot configuration. If you are not sure if your instrument has dual boot configuration, contact Illumina Tech Support.